in 1000 Genomes, FANS, GenePipe, MegaQuery, primerz, qualiseq, variowatch, visualSNP on Friday, August 10, 2012
Database Update
- Genepipe now is based on human genome assembly, NCBI BUILD 37.3.
- Update dbSNP version to dbSNP135.
- Update data of 1000 Genomes Project to October 2011 Integrated Variant Set, version 3.
- Due to the insufficient manpower to maintain mouse-related database, service of VisualSNP and FANS are temporarily unavailable. For the annotations of human genomic variants, please use VarioWatch.
- MegaQuery:
- Vcf format of annotation result files now is supported.
- Incorporate1000 Genome Project data into variant annotation CSV file.
- Improve annotation processing efficiency by parallel and streaming upload/download.
- Fix minor bugs.
- Fix bug of In-Silicon PCR validation.
- Primer-BLAST in NCBI now works normally.
- Increase the maximum number of variants for batch query to 10,000.
This entry was posted on Friday, August 10, 2012 at Friday, August 10, 2012 and is filed under 1000 Genomes, FANS, GenePipe, MegaQuery, primerz, qualiseq, variowatch, visualSNP. You can follow any responses to this entry through the RSS 2.0. You can